Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015950827.1_cds_XP_016491118.1_81469
CDS Infomation	[gene=LOC107810799] [db_xref=GeneID:107810799] [protein=putative lysine-specific demethylase JMJ16] [protein_id=XP_016491118.1] [location=join(20455..20745,20817..20888,21227..21304,21457..21942,22045..22266,23060..23221,23599..23967,24262..25756,25843..25946,26658..26855,27068..27355)] [gbkey=CDS]
Sequence	ATGGGGACTGAACTTGTTAGACATTGTGTCAAAGAGGAGGATATGGACATTTCATCAATT CCGCCTGGTTTTGAGTCACTTGCACCCTTCACCTTAAGAAAGGTGGATAATAATAGACTC ACGATTAATCAGCCATCCTCAGTGAGCGAATCAAAATCGCATGGAAGTCGGATAGAAGCA TATATTGAAGGTACCGAAGATGGAAAGATGATTAAGTCACTTAGGCGTAAACCTGGGATA AACTACGGGAAGTATGAGAAAAGCTCAGAAGATGAATCCGAACCCGAACAGAATCCCTTT GTAAGGCCGTCACTTCCAAAAGGAGTCATCCGTGGATGTGAAGCGTGTCTCAATTGCCAA AGGGTAACTGCGAGATGGAGGCCAGAGGAAGCTTGTAGGCCTGATCTCGAGGATGCTCCG GTGTTCTATCCAACTGAAGAGGAATTTGAAGATACCCTGACATATATGGCTAGCATACGC ACCAAAGCAGAGGCATATGGAATTTGTCGCATAGTACCGCCTGCTTCATGGAAACCTCCA TGCCCTCTTAAGGAAAAATATATATGGGAGAACTCCAAATTTGCTACCCGTATACAGAGG ATTGACAAACTTCAGAATCGAAATTCGATGAGAAAGATGTGGAAAGTTAATCATCATAAG AAGAAGAAAAGAAGAAGATGCTCAAAAACCGGAGTAGACTTGGGTAATGGTAGTGTTGAC ATTAGGACCCCTGATGAAGCTGCTATTTTTGAGGAGAGGTTTGGATTTGAACCTGGTCCA GAGTTTAGTCTGGACGCATTTCAGAAATATGCTGATGATTTTAAGGCCCAGTACTTCAGG CAGAATGAAGGGCAGTGTGAGCCTTCATTGGAGAACATTGAGGGTGAATTTTGGCGGATG GTCGAGAAACCTACTGAAGAGATCGAGGTTCTTTATGGGGCTGACTTGGAAACTGGAGTA TTTGGCAGTGGGTTCCCTAAACATGGCCATCAAGTTGGCTCTTCTGACCCGAAGTATGTA AACGCAGGATGGAACTTAAATAACTTCCCTAGGCTTCCAGGTTCTGTTCTTACATATGAG AGCAGCGACATATCTGGTGTTTTGGTGCCTTGGCTTTATATAGGAATGTGCTTTTCATCA TTCTGTTGGCATGTTGAAGATCACCATTTGTACTCATTAAATTATATGCATTTTGGGGCT CCAAAAATGTGGTATGGTGTGCCTGGAGCAGATGCGTTGAAATTGGAGGCTGCTATGAGG AAGAACTTGCCTGATCTCTTTGAAGAGCAGCCCGACCTGCTTCACAAGCTGGTTACACAA CTATCTCCCTCAATATTGAAGTCTGAGGGAGTTCCAGTTTATCGGTGTGTCCAAAATCCT GGAGAGTTTGTTTTGACCTTCCCAAGAGCTTATCATGCTGGTTTCAATTGTGGCTTCAAT TGTGCTGAAGCAGTAAATGTTGCTCCTGTCGATTGGTTACCTCATGGGCAGAATGCGATT GAGCTTTACCGTGAGCAGGGCCGGAAAACTTCCATATCCCATGATAAACTGTTACTGGGG GCAGCTCGAGATGCAGTCAAAGCACACTGGGAACTTAATTTACTGAGGAAGAATACCTCA ACTAATTTACGATGGAAAGATGTTTGTGGAAAAGATGGAATTTTGTCAAAAGCACTAAAG AACCGTGTTGAGATGGAGAGAGTGAGGAGGGAGTTTCTTTGCAATTCTTCACAGGCACTA AAGATGGAGAGCACTTTTGATGCTACTAATGAGAGGGAATGTAGTGTATGTTTTTTCGAT CTACACCTGTCCGCCGCCGGCTGTCATCATTGTTCGCCGGATAAATATGCATGCTTGAAC CATGCAAAACAACTGTGCACTTGTTCCTGGGGTGCCAAATTTTTCCTCTTCCGTTATGAC ATCAATGAGTTAAATGTACTAGTTGACGCTTTAGAAGGGAAATTGAGTGCAATTTATCGA TGGGCCAGGCAAGATCTTGGATTGGCTTTGAGTTCTTACGTAAACAAAGAGAGGCAAGTT GCAGGGCTTGTTGGTAAGTTATCCTGTAAAACTGAGGTACCGGTGCTAAAAGAGACAATC ACAGGATCCCCTATAGCTTCCATAAAAAAGGAAAAGGATGATGGAAATGCAAATCTCTTG ACAAGGGCCAGCGATATTACTTTATCATTGCATAAAAATAAACAATCCAGGGAACCATTA GCTTTGGAATCAATTAAGGCATCCTCTATGCCTGACAACTCTTCTCATGGAATTAAGGGA GCAAAGAATGGCTTCCAGAGCAAAAGTGAAGAATCTGTAAAGTTGGTTCCTGATAATAGA GCTCCAGTTTTGGCTTTGGAATCAATCAAGGCATCCTCTACCGCTGGCAATTCTTCTCAT GGAATTAAGGGGCCGAAGAATGGCATCCAGAGGAAAAGTGAAGAATCCATAAAGTTGGTT CCTGGTTATAGAAATACAGTTTGTCAACTTTCTGTGGAGGGTGGGTCATGTAGTAAGAAA TTACCGACAGATAAGCATGAAGCGAAGGGCTCTTCAGGTCTTGGTGATGGTGATGTGATC CTTCTCAGTGATGATGAGGGAGAGGAGATGAACAGATCAGTTCTTTTGGGAGATACTGTG GATAAACGTACAATGAGCATGGGTAGCAGTGCTAAACCTGTCTCAACAACATCCATTAAT GATGAGAAGGTTACCGGAGACAGAATTAGTGGTTCATCTAGTTCAGAGAGCATAAAAGTT GAGGATAATGCAAAAGATTTAATACATCAGAGACTTGATCAAGAAACACATTCTTCCCTT GGAGGTTCTTCTGTAATTATGGATCTTGATAAACATGCCCAAGGTTCTCAGGCTACAAAA GGGACTTCTGGATGTAGTATCATTTTAAGAGATGCAGATGCTTGTCCCAAGCCCCCACAG CCATGTGACTCTAAACCAAATAAAGAAGATAACCAAAATAAGGAAACGGAGTGTCCACAA CCTTTATCAAGTGACTCTCCCGTCTCTCAAAACAATTTGGACAGATATTTTCGTCAGAAA GGTCCTCGTATTGCAAAAGTCGTGAGGAGAATCAATTGCAATGTGGAACCTCTAGATTAT GGAGTTGTTCAGCCTGGCAAGCTATGGTGCGACAATCGGGCTATTTACCCCAAGGGATTC AGGAGCCGGGTCAGATATATTGATGTTTTAGATCCAGCAAATATGTGCTACTACGTTTCT GAAGTTCTGGATGCAGGGCGAGATGGGCCATTGTTTATGGTCTCGTTAGAGCATTGTTCG AATGAAGTTTTTGTTCATTTATCCGCTGTCAGATGCTGGGACATGGTCCGGGAGAGAGTG AATCAAGAAATAACAAAGCAACATAAGTTGGGAAAACTGAAGCTTCCTCCTTTGCAGCCA CCTGGAAGTCTTGATGGCATGGAAATGTTTGGTTTTTCTTCACCTGCAATTATACAGGTA ATTCAAGCTATGGATCAAAATCAAGTGTGTTCAGAATATTGGAAATCTCGACCTATGATG CAGAGAGCACCATCCGCATCTGTTAACGGTTTGAAACTCAATATAAAATCCGAGATCTCA AATGATCTTGCCGGAGCTGATACAGTACTCAGTGGCCTGATTAAGAAGGCAAACTCTGAA GAACTTCATGCATTGTACACACTTCTCAAAACCAATAATTTGACCCCTAATCAAGGTTTA ATGACTCGGCTTCTTAACGAAGAGATTGATAAGCGAGGAAGATGA

Peptide Sequence

PEP ID	XP_016491118.1
PEP Infomation	PREDICTED: putative lysine-specific demethylase JMJ16 [Nicotiana tabacum]
Sequence	MGTELVRHCVKEEDMDISSIPPGFESLAPFTLRKVDNNRLTINQPSSVSESKSHGSRIEA YIEGTEDGKMIKSLRRKPGINYGKYEKSSEDESEPEQNPFVRPSLPKGVIRGCEACLNCQ RVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLTYMASIRTKAEAYGICRIVPPASWKPP CPLKEKYIWENSKFATRIQRIDKLQNRNSMRKMWKVNHHKKKKRRRCSKTGVDLGNGSVD IRTPDEAAIFEERFGFEPGPEFSLDAFQKYADDFKAQYFRQNEGQCEPSLENIEGEFWRM VEKPTEEIEVLYGADLETGVFGSGFPKHGHQVGSSDPKYVNAGWNLNNFPRLPGSVLTYE SSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPGADALKLEAAMR KNLPDLFEEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHAGFNCGFN CAEAVNVAPVDWLPHGQNAIELYREQGRKTSISHDKLLLGAARDAVKAHWELNLLRKNTS TNLRWKDVCGKDGILSKALKNRVEMERVRREFLCNSSQALKMESTFDATNERECSVCFFD LHLSAAGCHHCSPDKYACLNHAKQLCTCSWGAKFFLFRYDINELNVLVDALEGKLSAIYR WARQDLGLALSSYVNKERQVAGLVGKLSCKTEVPVLKETITGSPIASIKKEKDDGNANLL TRASDITLSLHKNKQSREPLALESIKASSMPDNSSHGIKGAKNGFQSKSEESVKLVPDNR APVLALESIKASSTAGNSSHGIKGPKNGIQRKSEESIKLVPGYRNTVCQLSVEGGSCSKK LPTDKHEAKGSSGLGDGDVILLSDDEGEEMNRSVLLGDTVDKRTMSMGSSAKPVSTTSIN DEKVTGDRISGSSSSESIKVEDNAKDLIHQRLDQETHSSLGGSSVIMDLDKHAQGSQATK GTSGCSIILRDADACPKPPQPCDSKPNKEDNQNKETECPQPLSSDSPVSQNNLDRYFRQK GPRIAKVVRRINCNVEPLDYGVVQPGKLWCDNRAIYPKGFRSRVRYIDVLDPANMCYYVS EVLDAGRDGPLFMVSLEHCSNEVFVHLSAVRCWDMVRERVNQEITKQHKLGKLKLPPLQP PGSLDGMEMFGFSSPAIIQVIQAMDQNQVCSEYWKSRPMMQRAPSASVNGLKLNIKSEIS NDLAGADTVLSGLIKKANSEELHALYTLLKTNNLTPNQGLMTRLLNEEIDKRGR

Transcript Sequence

Gene sequence data has not been registered.